Penalized regression with multiple sources of prior effects

Armin Rauschenberger*, Zied Landoulsi, Mark A. Van De Wiel, Enrico Glaab

*Corresponding author for this work

Research output: Contribution to journalArticleResearchpeer-review

Abstract

Motivation: In many high-dimensional prediction or classification tasks, complementary data on the features are available, e.g. prior biological knowledge on (epi)genetic markers. Here we consider tasks with numerical prior information that provide an insight into the importance (weight) and the direction (sign) of the feature effects, e.g. regression coefficients from previous studies. Results: We propose an approach for integrating multiple sources of such prior information into penalized regression. If suitable co-data are available, this improves the predictive performance, as shown by simulation and application.

Original languageEnglish
Article numberbtad680
JournalBioinformatics
Volume39
Issue number12
DOIs
Publication statusPublished - 1 Dec 2023
Externally publishedYes

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