TY - JOUR
T1 - A single formula to describe radiation-induced protein relocalization
T2 - Towards a mathematical definition of individual radiosensitivity
AU - Bodgi, Larry
AU - Granzotto, Adeline
AU - Devic, Clément
AU - Vogin, Guillaume
AU - Lesne, Annick
AU - Bottollier-Depois, Jean François
AU - Victor, Jean Marc
AU - Maalouf, Mira
AU - Fares, Georges
AU - Foray, Nicolas
N1 - Funding Information:
We thank Madame Beaufrère for her assistance in editing English. L.B. was supported by the Association pour l'Ataxie Telangiectasie (APRAT), Université Saint-Joseph and Mount Lebanon Hospital (Beirut, Lebanon), CMIRA Rhône-Alpes Region Grant and the French-Lebanese CEDRE and EIFFEL project (French and Lebanese Ambassies). This work was also supported by the Association Pour la Recherche sur l’Ataxie-Telangiectasie (APRAT) , the Electricité de France (Comité de Radioprotection) , the Plan Cancer/AVIESAN “Micromegas project , the ANR “Hemi-breaks T” project and the Centre National d'Etudes Spatiales (CNES) .
PY - 2013/9/1
Y1 - 2013/9/1
N2 - Immunofluorescence with antibodies against DNA damage repair and signaling protein is revolutionarising the estimation of the genotoxic risk. Indeed, a number of stress response proteins relocalize in nucleus as identifiable foci whose number, pattern and appearance/disappearance rate depend on several parameters such as the stress nature, dose, time and individual factor. Few authors proposed biomathematical tools to describe them in a unified formula that would be relevant for all the relocalizable proteins. Based on our two previous reports in this Journal (. Foray et al., 2005; Gastaldo et al., 2008), we considered that foci response to stress is composed of a recognition and a repair phase, both described by an inverse power function provided from a Euler's Gamma distribution. The resulting unified formula called "Bodgi's function" is able to describe appearance/disappearance kinetics of nuclear foci after any condition of genotoxic stress. By applying the Bodgi's formula to DNA damage repair data from 45 patients treated with radiotherapy, we deduced a classification of human radiosensitivity based on objective molecular criteria, notably like the number of unrepaired DNA double-strand breaks and the radiation-induced nucleo-shuttling of the ATM kinase.
AB - Immunofluorescence with antibodies against DNA damage repair and signaling protein is revolutionarising the estimation of the genotoxic risk. Indeed, a number of stress response proteins relocalize in nucleus as identifiable foci whose number, pattern and appearance/disappearance rate depend on several parameters such as the stress nature, dose, time and individual factor. Few authors proposed biomathematical tools to describe them in a unified formula that would be relevant for all the relocalizable proteins. Based on our two previous reports in this Journal (. Foray et al., 2005; Gastaldo et al., 2008), we considered that foci response to stress is composed of a recognition and a repair phase, both described by an inverse power function provided from a Euler's Gamma distribution. The resulting unified formula called "Bodgi's function" is able to describe appearance/disappearance kinetics of nuclear foci after any condition of genotoxic stress. By applying the Bodgi's formula to DNA damage repair data from 45 patients treated with radiotherapy, we deduced a classification of human radiosensitivity based on objective molecular criteria, notably like the number of unrepaired DNA double-strand breaks and the radiation-induced nucleo-shuttling of the ATM kinase.
KW - DNA repair
KW - Immunofluorescence
KW - Radiation
KW - Radiosensitivity
UR - http://www.scopus.com/inward/record.url?scp=84879486267&partnerID=8YFLogxK
U2 - 10.1016/j.jtbi.2013.05.020
DO - 10.1016/j.jtbi.2013.05.020
M3 - Article
C2 - 23735818
AN - SCOPUS:84879486267
SN - 0022-5193
VL - 333
SP - 135
EP - 145
JO - Journal of Theoretical Biology
JF - Journal of Theoretical Biology
ER -